PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX91375.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 258aa    MW: 29380.9 Da    PI: 9.0583
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX91375.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF42.21e-131151343
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TT CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsst 43
                i n+s+r+ t+ kR++g++KK  E+ +LC++e++ i++ ++
  RDX91375.1 11 ITNDSKRKATLRKRKKGLIKKIDEINILCGIEACAILYTPH 51
                89***********************************9886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
MTRKKVNPAY ITNDSKRKAT LRKRKKGLIK KIDEINILCG IEACAILYTP HNPQPEVCPS  60
DWGVQSVLSK FRGVSELEQS KKKFNQESFL RQRIVKAQGQ LKKLKNENRK KEMTLLMFQY  120
FNDGNIFDKA NMIDLNDLSH MIDQILEEIG RKNNMSQTQE EIPIVENGGK PMIQGEQEFV  180
THVQGLVDII NGGGGDEMLT LGDVIESMKH QLATWKGKRL YLGESKDLES MIVDQLMGSL  240
QAYEKGSRED MMSLLSKS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVNPAYITNDSKRKATLRKRK
22226RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.13e-38M-type_MADS family protein