PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX91797.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 602aa MW: 68588.3 Da PI: 5.4609

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX91797.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0013	293	314	1	22
EEETTTTEEESSHHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt 22 + C Cgk F++ + k+H ++ RDX91797.1 293 FYCVLCGKKFKSEKQWKNHEQS 314 78*****************876 PP

Sequence ? help Back to Top
Protein Sequence Length: 602 aa Download sequence
MASAKRCHYE VLGVPIDCGA DEIRSAYRRL ALQRHPDKLV SSGLSQADAT AQFQELQHAY 60 EVLSDPKERA WYDSHRSRIL FSDSDSLSNS VVPDIFSFFS NTVYSGYSDA GKGFYKVYSD 120 VFDKIHANEV SYAKKLGLGV DAVRQAPVMG NLNCPYAQVT AFYGYWLGFS TVMDFCWVDG 180 YDVMAGPNRK SRRHMEEENN KMRRKARREY NDTVRRLGDF VKKRDKRVID MKLKRSVEME 240 KKKEEERERK MRLEKERKER AVAYEEPEWA KVEEVEDDYD EWLDEEKKNE KEFYCVLCGK 300 KFKSEKQWKN HEQSKKHKER VAEFRDSIGH EDDLEEEEEE GKERSDCEED GIGVNDDPDC 360 GVGDLEERIR DGLNVEEGET RNVSNDDDDG DGDEFFDASY VKEREEHTFG DDCNEEEDEN 420 GVLEAMVAGH KNRKPIASTH KPKTSVVPSQ IENENDGIDS MEYNNRTTTR KKRRAKKEKG 480 RKNCEESDGS AASGNGENAN GNGSDNSHAE ESSSQHFVKN EDNGMANGQV GRDKKGFNQP 540 ADKKGASKDT KTKAKISSKG RKAKGTSKNV GNICEACGEE FESRNRLHKH LGDSGHATIK 600 GR

Sequence ? help Back to Top

Protein Sequence Length: 602 aa Download sequence

MASAKRCHYE VLGVPIDCGA DEIRSAYRRL ALQRHPDKLV SSGLSQADAT AQFQELQHAY  60
EVLSDPKERA WYDSHRSRIL FSDSDSLSNS VVPDIFSFFS NTVYSGYSDA GKGFYKVYSD  120
VFDKIHANEV SYAKKLGLGV DAVRQAPVMG NLNCPYAQVT AFYGYWLGFS TVMDFCWVDG  180
YDVMAGPNRK SRRHMEEENN KMRRKARREY NDTVRRLGDF VKKRDKRVID MKLKRSVEME  240
KKKEEERERK MRLEKERKER AVAYEEPEWA KVEEVEDDYD EWLDEEKKNE KEFYCVLCGK  300
KFKSEKQWKN HEQSKKHKER VAEFRDSIGH EDDLEEEEEE GKERSDCEED GIGVNDDPDC  360
GVGDLEERIR DGLNVEEGET RNVSNDDDDG DGDEFFDASY VKEREEHTFG DDCNEEEDEN  420
GVLEAMVAGH KNRKPIASTH KPKTSVVPSQ IENENDGIDS MEYNNRTTTR KKRRAKKEKG  480
RKNCEESDGS AASGNGENAN GNGSDNSHAE ESSSQHFVKN EDNGMANGQV GRDKKGFNQP  540
ADKKGASKDT KTKAKISSKG RKAKGTSKNV GNICEACGEE FESRNRLHKH LGDSGHATIK  600
GR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	189	226	RKSRRHMEEENNKMRRKARREYNDTVRRLGDFVKKRDK
2	470	477	RKKRRAKK
3	471	476	KKRRAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G74250.1	1e-143	C2H2 family protein