PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX92734.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 349aa MW: 39913.3 Da PI: 7.2487

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX92734.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	38.7	2.4e-12	44	100	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n ++k+ + g ++ +e Aa a++ a++k++g RDX92734.1 44 SIYRGVTRHRWTGRYEAHLWDkNCWNEsQNKKGRQGAYDDEEAAAHAYDLAALKYWG 100 57*****************99998898888888******************98 PP
2	AP2	51.3	2.9e-16	143	194	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g RDX92734.1 143 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 194 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MAKQQTQKNN VSANNNLNAT NTVTTKAKRT RRSVPRDSPP RRSSIYRGVT RHRWTGRYEA 60 HLWDKNCWNE SQNKKGRQGA YDDEEAAAHA YDLAALKYWG QDTILNFPLA TYQNELKEME 120 GQSREEYIGS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYATQEE 180 AATAYDMAAI EYRGLNAVTN FDLSRYIKWL KPNNNNNIIN SNLFDCNTNC ETKFTPNLKQ 240 EQGFNILHSQ ESFNNEEAIL TQPRPAAATS ALGLLLQSSK FKEMMEMTSA VDLSTPPPES 300 ELPPCTFPDD IQTYFECEDS NRYGEGDHIM ISELNSFVPP IFHCDDFEA

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MAKQQTQKNN VSANNNLNAT NTVTTKAKRT RRSVPRDSPP RRSSIYRGVT RHRWTGRYEA  60
HLWDKNCWNE SQNKKGRQGA YDDEEAAAHA YDLAALKYWG QDTILNFPLA TYQNELKEME  120
GQSREEYIGS LRRKSSGFSR GVSKYRGVAR HHHNGRWEAR IGRVFGNKYL YLGTYATQEE  180
AATAYDMAAI EYRGLNAVTN FDLSRYIKWL KPNNNNNIIN SNLFDCNTNC ETKFTPNLKQ  240
EQGFNILHSQ ESFNNEEAIL TQPRPAAATS ALGLLLQSSK FKEMMEMTSA VDLSTPPPES  300
ELPPCTFPDD IQTYFECEDS NRYGEGDHIM ISELNSFVPP IFHCDDFEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	3e-81	AP2 family protein