PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX92853.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 570aa MW: 62131.3 Da PI: 8.3742

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX92853.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17	1.6e-05	104	126	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H RDX92853.1 104 FVCEICNKGFQRDQNLQLHRRGH 126 89*******************88 PP
2	zf-C2H2	16	3.3e-05	180	202	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H++t+ RDX92853.1 180 WKCDKCSKRYAVQSDWKAHQKTC 202 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
SPVQMSNISG DEGSFSSGNN GEEVHQESQQ QQLQNQLHDS ISGPATACNS NASTNQQQAN 60 KKKRNLPGTP GKYSTTPTSI FVSAHPNAEV IALSPTTLMA TNRFVCEICN KGFQRDQNLQ 120 LHRRGHNLPW KLRQRSSSEV KKRVYVCPEP SCVHHNPARA LGDLTGIKKH YSRKHGEKKW 180 KCDKCSKRYA VQSDWKAHQK TCGTREYKCD CGTIFSRRDS FITHRAFCDA LTEENNRVNQ 240 GLTSGMPAKL QSQIPDLMST MPLNTSPNTG SKLGDYDPKN PLKSLPQVLV PIPFNSMSMG 300 GGMFSTNAGA LFGGPKTMSP SSSSLQLGSN TSSSFNYLQD NKNGALIAAS AQMSATALLQ 360 KAAQMGATAS NSSINSPMMQ KGFVSGPDHV SSTTRPPYSG SMLQHNPSYD HFPPQPDLSH 420 MAGVSGGGVF INQLFHKGQE MSQVFDTNTT TAGSTINDVG MFGQMPMGSD HNPGLMKNDV 480 EQEVTNSSLI HGRDVAEGNS MQPSRFGGSS DMTRVHDFLG IGGSTSRVAS LHEPQQHLEA 540 LSHQRSQVMN HFHHHFPHED STIEEPMWDV

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

SPVQMSNISG DEGSFSSGNN GEEVHQESQQ QQLQNQLHDS ISGPATACNS NASTNQQQAN  60
KKKRNLPGTP GKYSTTPTSI FVSAHPNAEV IALSPTTLMA TNRFVCEICN KGFQRDQNLQ  120
LHRRGHNLPW KLRQRSSSEV KKRVYVCPEP SCVHHNPARA LGDLTGIKKH YSRKHGEKKW  180
KCDKCSKRYA VQSDWKAHQK TCGTREYKCD CGTIFSRRDS FITHRAFCDA LTEENNRVNQ  240
GLTSGMPAKL QSQIPDLMST MPLNTSPNTG SKLGDYDPKN PLKSLPQVLV PIPFNSMSMG  300
GGMFSTNAGA LFGGPKTMSP SSSSLQLGSN TSSSFNYLQD NKNGALIAAS AQMSATALLQ  360
KAAQMGATAS NSSINSPMMQ KGFVSGPDHV SSTTRPPYSG SMLQHNPSYD HFPPQPDLSH  420
MAGVSGGGVF INQLFHKGQE MSQVFDTNTT TAGSTINDVG MFGQMPMGSD HNPGLMKNDV  480
EQEVTNSSLI HGRDVAEGNS MQPSRFGGSS DMTRVHDFLG IGGSTSRVAS LHEPQQHLEA  540
LSHQRSQVMN HFHHHFPHED STIEEPMWDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-105	C2H2 family protein