PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX92960.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 92aa MW: 10701.1 Da PI: 7.9248

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX92960.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11	0.0013	19	41	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C++Cg + s k + +Hi++H RDX92960.1 19 YFCQYCGICRSKKTLIASHINSH 41 78********************6 PP
2	zf-C2H2	20.1	1.7e-06	64	85	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg +F+ + +L +H+ +H RDX92960.1 64 TCEECGATFKKHAYLLQHMLSH 85 6*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 92 aa Download sequence
MGETAETEER PKFRDIRRYF CQYCGICRSK KTLIASHINS HHKEEAEKAR AVRDPEHEAV 60 KSNTCEECGA TFKKHAYLLQ HMLSHSPQEI NL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	5e-20	C2H2 family protein