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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX93629.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | ERF | ||||||||
| Protein Properties | Length: 205aa MW: 22742.1 Da PI: 4.3987 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 56.6 | 6.6e-18 | 17 | 66 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr +k +g++v+eIr p++ r+r++lg++++ae+Aa+a +aa+ +l+g
RDX93629.1 17 SYRGVRKRK-WGKYVSEIRLPNS---RQRIWLGSYDSAEKAARAFDAAMFCLRG 66
6*****999.**********933...5*************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 205 aa Download sequence |
MVKPVVEKPA AERSNTSYRG VRKRKWGKYV SEIRLPNSRQ RIWLGSYDSA EKAARAFDAA 60 MFCLRGSGAK FNFPNDPPEI DGGRSMTPSQ IQIAAARFAN SEPRKECSGH RVESSSSDEE 120 TTSVPESSSP PLSDVTVQND AEFLSGSFPD LFSDLGSGNF GPDFSVFPGF DDFSTDYLFP 180 ELPSFDYGEE NMDGLIIQDS FLWNF |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G19210.1 | 4e-55 | ERF family protein | ||||




