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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX94015.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | SBP | ||||||||
| Protein Properties | Length: 131aa MW: 15317.1 Da PI: 8.9468 | ||||||||
| Description | SBP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | SBP | 45.5 | 2e-14 | 12 | 42 | 48 | 78 |
SEEETTT--SS--S-STTTT-------S--- CS
SBP 48 rfhelsefDeekrsCrrrLakhnerrrkkqa 78
rfh +sefD++krsCrrrLa+hnerrrk+++
RDX94015.1 12 RFHVVSEFDDSKRSCRRRLAGHNERRRKSSH 42
9***************************986 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 131 aa Download sequence |
MEKIWWRGLD FRFHVVSEFD DSKRSCRRRL AGHNERRRKS SHDSVARNSS QGGCALSLLS 60 SRSDSWLSPS DLSTRCSAAL RELIAENRAA IMARQFVSDR DWHIHHHAVE DFKEIQPESN 120 YFPQQMFPQT Q |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT2G33810.1 | 4e-13 | SBP family protein | ||||




