PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX94060.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MIKC_MADS
Protein Properties Length: 238aa    MW: 27844.5 Da    PI: 8.779
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX94060.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF91.63.7e-29959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                +rienk+nrqvtfskRr g+lKKA+ELSvLCdaev +iifss+gkl+ yss
  RDX94060.1  9 ERIENKINRQVTFSKRRSGLLKKAFELSVLCDAEVGLIIFSSRGKLFQYSS 59
                69***********************************************96 PP
2K-box70.45.7e-24821711099
       K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                  e ++++++qe+ kL++++e+L+r+qRh++Ge+Le+Ls+keLq+Le+qL+  l   R+++++ l++  +el++k ++l++ nk+L++k +
  RDX94060.1  82 LELESQNSYQEFLKLRAKYESLERTQRHFQGEELEPLSFKELQSLEKQLDITLALTRQHQMKKLVARADELREKVNKLEDLNKQLQSKEK 171
                 455689********************************************************************************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MGRGRVVLER IENKINRQVT FSKRRSGLLK KAFELSVLCD AEVGLIIFSS RGKLFQYSST  60
DINKIIERYR QCRYHKSHAG DLELESQNSY QEFLKLRAKY ESLERTQRHF QGEELEPLSF  120
KELQSLEKQL DITLALTRQH QMKKLVARAD ELREKVNKLE DLNKQLQSKE KDEFSGLILD  180
HSNCIQLRAT QADQFESGTT LNTWYELIQH HEIASKEKEI DTRTEGSQSS HNKNSGWL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.18e-58MIKC_MADS family protein