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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX94102.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | C2H2 | ||||||||
| Protein Properties | Length: 434aa MW: 50295.5 Da PI: 7.3589 | ||||||||
| Description | C2H2 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-C2H2 | 12 | 0.00066 | 192 | 214 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y C+ C +rk++L+rH+r++
RDX94102.1 192 YFCEFCLNFMKRKEQLQRHMRKC 214
78*******************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 434 aa Download sequence |
MGSLETPTSA ENGSAPHAGN GKSPSVDGVE AAPEPDVSKR RRSSVLPLEV GTRVMCRWRD 60 SKYHPVKVIE RRKVPYAMPN DYEYYVHYTE FNRRLDEWVK LEQLDLESVE AVVDEKVEEK 120 GATGLKMTRH QKRKIDETHV EGHEELDAAS LREHEEFTKV KNIATIELGR YEIETWYFSP 180 FPPEYNDCLK LYFCEFCLNF MKRKEQLQRH MRKCDLKHPP GDEIYRSGTL SMFEVDGKKN 240 KVYGQNLCYL AKLFLDHKTL YYDVDLFLFY VLCECDDRGC HMVGYFSKEK HSEESYNLAC 300 ILTLPPYQRK GYGKFLIAFS YELSKKEGKV GTPERPLSDL GLLSYRGYWT RVLLDILKKH 360 KGNISIKELS DMTAIKAEDI LTTLQSLELI QYRKGQHVIC ADPKVLDRHL KAAGRGGLEV 420 DVSKLIWTPY KEQS |




