PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX94197.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 240aa MW: 26971.2 Da PI: 8.4631

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX94197.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16	3.6e-05	66	88	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C++ Fs++ L H++ H RDX94197.1 66 FSCTYCKREFSTSQALGGHQNAH 88 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MKLKEKCLKP ELKKACNSKR GVVLNSTKFS KDDMTQEPLV NKVVDSSLSD SEGVGDENRK 60 GEAKTFSCTY CKREFSTSQA LGGHQNAHKQ ERALAKRHQG FDAGGFGYFP YYSYPNFYNS 120 HSLYGGSFNK ALGVRTESMI HKHPWTPQYD HTWLRRDHRI PNKSIFDEFE IMKSDATLMP 180 RDDDNGNANG RTLSLFPNSA TNSLTHLVNT TTLATKIDDD SMPEETSKGA SCNLDLSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01860.1	4e-16	C2H2 family protein