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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDX94783.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | bHLH | ||||||||
| Protein Properties | Length: 291aa MW: 32146.9 Da PI: 6.9355 | ||||||||
| Description | bHLH family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | HLH | 30.2 | 8.3e-10 | 213 | 254 | 9 | 55 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
++RR+ri +++ L+el+P+ K++ +++LekA+ Y+k Lq
RDX94783.1 213 AKNRRERISERLKILQELVPNG-----SKVDLVTMLEKAISYVKFLQ 254
69*******************5.....5******************9 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 291 aa Download sequence |
MALSLTSHGV NEYQKTVVEE EDGSQSTNGL SNDSASAITH SHPLCGNGYV HKSTHYQLEE 60 AESLINFKAN EFSNLMQGSE SFLSFQQSWL FSKECNLHEG YNQWNHVSPK STTDMRLVQN 120 LSCFETATGY SSISNGAKEK QCGESSSSGW LYSEPNVPSD SLHESAAQDL VLRKRYFMGE 180 NMQAANAKKP CTTASKAAKP KSSPCKDPQS VAAKNRRERI SERLKILQEL VPNGSKVDLV 240 TMLEKAISYV KFLQLQVKVL AADEFWPVQG GKAPDISQVR QAIDAILSSQ R |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT5G37800.1 | 4e-60 | bHLH family protein | ||||




