PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX94988.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 226aa MW: 25214.7 Da PI: 9.4539

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX94988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	115.7	3e-36	33	134	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +C aCk+ rrkC +C++apyf ++q +++fa+vhk+FG +nv+k+l+++ ++r+++++sl+yeA+ar+ dPvyG+++ i + q+q+++l+ael +++ RDX94988.1 33 PCGACKYIRRKCHIQCIFAPYFVSDQgSAQFAMVHKVFGINNVSKMLSNVALDHRHEVVASLLYEAQARLTDPVYGCLSAIVAFQKQVASLQAELLMRQ 131 7*********************9989*****************************************************************9999 PP DUF260 99 eel 101 ++l RDX94988.1 132 NQL 134 875 PP

Sequence ? help Back to Top
Protein Sequence Length: 226 aa Download sequence
TKGGNETTSR VTNKRKGKGT NKEHPKSEVT SPPCGACKYI RRKCHIQCIF APYFVSDQGS 60 AQFAMVHKVF GINNVSKMLS NVALDHRHEV VASLLYEAQA RLTDPVYGCL SAIVAFQKQV 120 ASLQAELLMR QNQLINARIS YATLLQSIQQ QPQPNINVVK QSTYSNNSPN STNLMSFINP 180 DFDHLTMQTA SSSHNLEPLQ FSRLPQNEEE SRIPQVFNNG MAHLIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03760.1	3e-50	LBD family protein