PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX95374.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 346aa MW: 39182.7 Da PI: 7.8415

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX95374.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.8	1e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +lv +++++G+g+W++++ g+ R+ k+c++rw +yl RDX95374.1 14 KGPWTPEEDIILVSYIQEHGPGNWRSVPTNTGLSRCSKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	45.6	1.6e-14	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E+ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l RDX95374.1 67 RGNFTPHEEGMIIHLQALLGNK-WAAIASYLP-QRTDNDIKNYWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 346 aa Download sequence
MGRPPCCDKV GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLSRCS KSCRLRWTNY 60 LRPGIKRGNF TPHEEGMIIH LQALLGNKWA AIASYLPQRT DNDIKNYWNT HLKKKLKKFQ 120 AALDPHSASD STTSGQYLPK GFNDRRSLDM SSNNNHASSS LRLSQSQSST TYASSTENIS 180 RLLEGWMRSS PKPLMRTQDE ELQSNDDDNN NNNNNFESTK LVKCASSVPA LNLHHKRNKD 240 VEHEGCVDMV SHEEFDSILS FENLNNAAWD RSTCDSMPEK SSEAAERNRL KSENNSAPPL 300 SFLEKWLLDE NVGQVEEMME LSPIGLEKGH LYFRPYKGYF GNSGKK

Sequence ? help Back to Top

Protein Sequence Length: 346 aa Download sequence

MGRPPCCDKV GIKKGPWTPE EDIILVSYIQ EHGPGNWRSV PTNTGLSRCS KSCRLRWTNY  60
LRPGIKRGNF TPHEEGMIIH LQALLGNKWA AIASYLPQRT DNDIKNYWNT HLKKKLKKFQ  120
AALDPHSASD STTSGQYLPK GFNDRRSLDM SSNNNHASSS LRLSQSQSST TYASSTENIS  180
RLLEGWMRSS PKPLMRTQDE ELQSNDDDNN NNNNNFESTK LVKCASSVPA LNLHHKRNKD  240
VEHEGCVDMV SHEEFDSILS FENLNNAAWD RSTCDSMPEK SSEAAERNRL KSENNSAPPL  300
SFLEKWLLDE NVGQVEEMME LSPIGLEKGH LYFRPYKGYF GNSGKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08810.1	2e-86	MYB family protein