PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX95516.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 403aa    MW: 45989.9 Da    PI: 6.6695
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX95516.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF44.91.5e-14948140
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviif 40
                k+i+n++ r++tf +R++g++KK +E S++C++e++ i++
  RDX95516.1  9 KPISNERSRKTTFQQRKKGLIKKISEFSTMCGVEACFIVY 48
                68************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    
MGRARITLKP ISNERSRKTT FQQRKKGLIK KISEFSTMCG VEACFIVYDD VNGDAGRVTW  60
PQDPTMVRSI IENYERQKNE RPPKTFDIQD FFENRKNMIE AEISKLHKQA REIKYPTWDP  120
AFSNMGEEQL RAFIAKVDAK IDDCDQRINM LKNMDQTEAN FSVMQNMAQA SASSSHPSQD  180
NFMQNISQSQ IIPTPMEPLL IDNNGRVNFT NSTYQVGRPS SHGINMLRNM QQSDACFSYM  240
PNMAREGSTS SHPIQLNCLQ SNSQSQFKLE TLKPLIQNND MIDFTNQVYV PLDSTNQLGD  300
LEQWVTRPIG IQNWSNQQGG DLVGLTSQPK ESILQNIPVK SQNEQHGVVL PAFPSSLDKF  360
QTDYYNMPDL AICLDEGLVN VSENRKYTRC VFNKKNEMGR SLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.12e-22M-type_MADS family protein