PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX96048.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 285aa MW: 32209.7 Da PI: 7.5942

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX96048.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.1	2e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l ++v+ +G+g+W++ ++ g+ R++k+c++rw +yl RDX96048.1 14 KGPWTPEEDLKLTNYVQIHGPGNWRSLPKNAGLQRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	52.9	8.5e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr++ eE++ +++++ lG++ W++Ia++++ gRt++++k++w+++ RDX96048.1 67 RGRFSLEEEDTIIQLHSFLGNK-WSAIAAKLP-GRTDNEIKNYWNTH 111 89******************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MGRVPCCDKT GLKKGPWTPE EDLKLTNYVQ IHGPGNWRSL PKNAGLQRCG KSCRLRWTNY 60 LRPDIKRGRF SLEEEDTIIQ LHSFLGNKWS AIAAKLPGRT DNEIKNYWNT HIRKRLLRMG 120 IDPVTHAPRL DLLDMPSILR SVLGAHVLMN PGLLKLPATA TATASLLPRN YLQNQVTPPL 180 DLTQLHIPMS STPSSENLVL QQNQVDLVGN YYPDLEHFLN NANQNMGYDS VLPTPVSSPH 240 RLNSLSAYVR NGAEEETESY HDLFEFEIPQ SLDMADIFCN VTQTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G21440.1	1e-91	MYB family protein