PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX96185.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

E2F/DP

Protein Properties

Length: 394aa MW: 44467.8 Da PI: 8.5486

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX96185.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	77.5	1.3e-24	12	77	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l++k+ ++ + l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++wkg RDX96185.1 12 RKQKSLGLLCTNFLSLYNKEGTRLIGLDDAASRL---GV--ERRRIYDIVNVLESVGVLARKAKNQYTWKG 77 79******************************.....****************************98 PP
2	E2F_TDP	62.8	4.9e-20	147	244	1	71
E2F_TDP 1 rkeksLrlltqkflkllek................see.givtlnevakeLvse.....dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 r+eksL lltq+f+kl+ + ++ ++++l+e+ak L+ + +++k+RR+YDi+NVL+++nliek ++k+++rw g RDX96185.1 147 RREKSLALLTQNFVKLFVCsnvsvanlsddsltfqIDNiEMISLDEAAKLLLGNahntsIMRTKVRRLYDIANVLSSMNLIEKthttnTRKPAFRWLG 244 689***********9999999999999999998566699******999999*********************999*****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MSSSSTHHTY SRKQKSLGLL CTNFLSLYNK EGTRLIGLDD AASRLGVERR RIYDIVNVLE 60 SVGVLARKAK NQYTWKGFSA IPAALQELKD ESLKENPGSF DDSIDSTKVS DDEDEEETFP 120 NPSTESQGDK ANPDSCAPVK CSKNENRREK SLALLTQNFV KLFVCSNVSV ANLSDDSLTF 180 QIDNIEMISL DEAAKLLLGN AHNTSIMRTK VRRLYDIANV LSSMNLIEKT HTTNTRKPAF 240 RWLGWRGKIW SESVDLAHNS NINELGKRMF GADITNISFK RNKVDLLMDG QNSKLQNQQE 300 SISYRAQPEK SNSIKDAKQT SKSYQFGPFA PAYVPKVGAS ENNSVKQVQD WDNLAQVHRP 360 QYQNQALKEL FSHYMEAWES WYSEVAGKRS TKTL

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MSSSSTHHTY SRKQKSLGLL CTNFLSLYNK EGTRLIGLDD AASRLGVERR RIYDIVNVLE  60
SVGVLARKAK NQYTWKGFSA IPAALQELKD ESLKENPGSF DDSIDSTKVS DDEDEEETFP  120
NPSTESQGDK ANPDSCAPVK CSKNENRREK SLALLTQNFV KLFVCSNVSV ANLSDDSLTF  180
QIDNIEMISL DEAAKLLLGN AHNTSIMRTK VRRLYDIANV LSSMNLIEKT HTTNTRKPAF  240
RWLGWRGKIW SESVDLAHNS NINELGKRMF GADITNISFK RNKVDLLMDG QNSKLQNQQE  300
SISYRAQPEK SNSIKDAKQT SKSYQFGPFA PAYVPKVGAS ENNSVKQVQD WDNLAQVHRP  360
QYQNQALKEL FSHYMEAWES WYSEVAGKRS TKTL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-129	E2F/DP family protein