PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX96333.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 236aa MW: 26616.4 Da PI: 9.954

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX96333.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.9	2e-06	84	103	1	20
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++Cp C k+F+r nL+ H+ RDX96333.1 84 FSCPVCLKTFNRYNNLQMHM 103 89*****************9 PP
2	zf-C2H2	12	0.00066	168	190	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +Cgk+ k + ++H +++ RDX96333.1 168 FTCRKCGKPLAVKGDWRTHEKNC 190 89*****************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MNQNQLQPLP LLSSFLGSAP KEATLLQNQN PKACEDVTVA LHIGLPDNSS GSTNNHGFVN 60 TTTHVPNNYW IPTQEQILIG FSHFSCPVCL KTFNRYNNLQ MHMWGHGSQY RRGPESLKRS 120 HPRPLLDIPC YCCCGGCKNN IEHPRAKALK DFRTLQTHYK RKHGAKPFTC RKCGKPLAVK 180 GDWRTHEKNC GKRWLCLCGS DFKHKRSLKD HIKAFGFGHT PFSSSSSSSQ PNPSNF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	115	120	ESLKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34790.1	8e-96	C2H2 family protein