PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX96486.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 220aa MW: 23920.6 Da PI: 7.2854

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX96486.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	136	1.4e-42	67	166	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++k+l++lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q+++l+a+la++++ RDX96486.1 67 PCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQAQLAKAQA 165 7**********************************************************************************************9997 PP DUF260 100 e 100 e RDX96486.1 166 E 166 6 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MEYKVKTTTS SPPIPIHVPT MLSNSPPSSS SSPPSQSPTP FPSPSQGSPS AAPPSPPPPP 60 PPVVVSPCAA CKILRRRCVE KCVLAPYFPP TDPLKFTIAH RVFGASNIIK FLQELPESQR 120 ADAVSSMVYE ANARIRDPVY GCAGAICQLQ KQVSELQAQL AKAQAEVVNM QCQQANLVAL 180 ICMEMRQSPD QHMLQPQPHV DMSCFIEDNT FGTAWEPLWT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	4e-66	LBD family protein