PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX96772.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MIKC_MADS

Protein Properties

Length: 288aa MW: 32833.2 Da PI: 10.0793

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX96772.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	98.9	2e-31	101	150	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+ RDX96772.1 101 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 150 79***********************************************8 PP
2	K-box	46.1	2.1e-16	186	243	36	93
K-box 36 RhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenka 93 +++Ge L++++ k+L++Le++Lek++++iRskK+ l+++ + l+ k e+++ +++ RDX96772.1 186 EQMMGEALSTMNAKDLKNLETKLEKGISRIRSKKEIDLHNSNQLLRAKIAENDRSEHN 243 79**************************************999999998888766554 PP

Sequence ? help Back to Top
Protein Sequence Length: 288 aa Download sequence
KKREKYIHYS AKGWNLLSCP AYNFSTLFPH QGEEAVPNFH LFFLFEILPN LTKTAQRTKF 60 TYENRMMIFS LIQLASMAFP NQSTSSVSPQ RKMGRGKIEI KRIENTTNRQ VTFCKRRNGL 120 LKKAYELSVL CDAEVALIVF SSRGRLYEYA NNSVKASIER YKKASSDSSS GGSTSEANAQ 180 KLPNYEQMMG EALSTMNAKD LKNLETKLEK GISRIRSKKE IDLHNSNQLL RAKIAENDRS 240 EHNINVLSGS TSYESMQSQF ESRGFFQVTG LQPNNNQYAG QDHMSLQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G18960.1	3e-82	MIKC_MADS family protein