PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX97429.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C3H

Protein Properties

Length: 522aa MW: 59822.6 Da PI: 6.299

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX97429.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	19.2	2.1e-06	86	109	3	27
S---SGGGGTS--TTTTT-SS-SSS CS zf-CCCH 3 telCrffartGtCkyGdrCkFaHgp 27 +++C ff+ G+C+ GdrC+F Hgp RDX97429.1 86 MVPCYFFFH-GFCNKGDRCTFLHGP 109 6899999.***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MDEDSVKRNT DCVYFLASPL TCKKGAECEY RHNEIARLNP RECWYWVSGQ CLNPTCAFRH 60 PPLDGHTGVP VPSEPTQTSL PANKSMVPCY FFFHGFCNKG DRCTFLHGPD DSNFTVKPVK 120 NDNGSTDAFN LENKTLSGNR TGVVSTPTDQ SLTAPKNLSD FKLQPKEGHQ LQLPKNVKRQ 180 GGCLEISALE YKEAAVSRSD SPFPDDGFVH NASHLCTEQS SDEQVSSHIE PEERWESSPH 240 SPGFDVLVHD ELENLGYEED PEYLPVLERD EQELNEQYMG YEFEDPADYD TMFPEADILY 300 EQETYDGYGC LDRDLTHTNG RTVHAYSRDI FLDSILSRKR IRMSAEMAAY EKNLDLRDHL 360 RRRREINGPP VTGFLRRQES SSLMVQNQER HQRHGIEQRP SRRLTSQLGY SAMDSIGEVE 420 TLTIANKQRL FRQSQQQRPK KHYREKLANR QFLSSKISRK PVLKQRGFIH ESTTFSGPKT 480 LAEIKEEKKK AEGSLHCKST STDFQDPKPL SEILKDKRTM DQ

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MDEDSVKRNT DCVYFLASPL TCKKGAECEY RHNEIARLNP RECWYWVSGQ CLNPTCAFRH  60
PPLDGHTGVP VPSEPTQTSL PANKSMVPCY FFFHGFCNKG DRCTFLHGPD DSNFTVKPVK  120
NDNGSTDAFN LENKTLSGNR TGVVSTPTDQ SLTAPKNLSD FKLQPKEGHQ LQLPKNVKRQ  180
GGCLEISALE YKEAAVSRSD SPFPDDGFVH NASHLCTEQS SDEQVSSHIE PEERWESSPH  240
SPGFDVLVHD ELENLGYEED PEYLPVLERD EQELNEQYMG YEFEDPADYD TMFPEADILY  300
EQETYDGYGC LDRDLTHTNG RTVHAYSRDI FLDSILSRKR IRMSAEMAAY EKNLDLRDHL  360
RRRREINGPP VTGFLRRQES SSLMVQNQER HQRHGIEQRP SRRLTSQLGY SAMDSIGEVE  420
TLTIANKQRL FRQSQQQRPK KHYREKLANR QFLSSKISRK PVLKQRGFIH ESTTFSGPKT  480
LAEIKEEKKK AEGSLHCKST STDFQDPKPL SEILKDKRTM DQ