PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX97472.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MIKC_MADS
Protein Properties Length: 245aa    MW: 27866.7 Da    PI: 6.7854
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX97472.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF92.32.3e-29959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                k+ien   rqvtfskRrng+lKKA+ELSvLCdaevaviifsstgk+ye+s+
  RDX97472.1  9 KKIENLNSRQVTFSKRRNGLLKKAKELSVLCDAEVAVIIFSSTGKVYEFSN 59
                68***********************************************95 PP
2K-box59.81.1e-209317320100
       K-box  20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                 + + Lk+ei +L+    +++G++L+ LslkeLq+Le+qL +++  +++kK++ l+eq+++++ +e+++  en+ Lrk+lee
  RDX97472.1  93 DTTFLKDEITKLRLAYLRMMGKELDGLSLKELQHLENQLSEGILAVKDKKEQELVEQLRRSRIQEQKVMLENEVLRKQLEE 173
                 56679*************************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MGRGKIEIKK IENLNSRQVT FSKRRNGLLK KAKELSVLCD AEVAVIIFSS TGKVYEFSNT  60
SMEHTLSRYS KGTESDCAEQ PVDVPPTNVM EPDTTFLKDE ITKLRLAYLR MMGKELDGLS  120
LKELQHLENQ LSEGILAVKD KKEQELVEQL RRSRIQEQKV MLENEVLRKQ LEEIQNKTKT  180
QFLEFSSLDR TFSKNGSKPH FDCASEENDL SDTSLQLGLS TDYGRQRKAL KIEPCNDSGS  240
QVASQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57390.11e-69MIKC_MADS family protein