PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX97552.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 493aa MW: 54192.4 Da PI: 7.7892

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX97552.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.7	4.4e-05	91	113	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H RDX97552.1 91 FICEICSKGFQRDQNLQLHRRGH 113 89*******************88 PP
2	zf-C2H2	11.3	0.0011	167	189	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +++ RDX97552.1 167 WKCDKCSKKYAVQSDWKAHSKVC 189 58*****************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 493 aa Download sequence
MSNSNITSCD SWSFSTENNT GEDAAVKQQL EMLGQLHSPN SNTSTTTNNS NAENTNSQPP 60 VKKKRNLPGN PDPSAEVIAL SPNTLVATNR FICEICSKGF QRDQNLQLHR RGHNLPWKLK 120 LRTSTEVRKR VYVCPEPSCV HHNPARALGD LTGIKKHFSR KHGEKKWKCD KCSKKYAVQS 180 DWKAHSKVCG TKEYKCDCGT IFSRRDSFIT HRAFCDALSE ENNKFNEGQQ LSSNMHSSNM 240 QQPIIPNLVA SLPINTNNHK HVHPLSLPHD LVMTMPAKPF NSNMAAFTRS LSSPSQLSST 300 SPNIMFEENA LHSPHMSATA LLQKAAQMSA TVNSNSSVIT EKSFVTSMAP PSYGVMNHDV 360 HDDGQQDLSH YNFNGIDGGG MGMSGLDMFN VILDQSKALS KIIEQNNRSN SNGVNLHAMN 420 GRSSGSIKGS EDVMTLDFLG IGVGGGGDGN FYDGDEQSEM AARDEIWRNW SNKNAGFESF 480 SAANISILPG REE

Sequence ? help Back to Top

Protein Sequence Length: 493 aa Download sequence

MSNSNITSCD SWSFSTENNT GEDAAVKQQL EMLGQLHSPN SNTSTTTNNS NAENTNSQPP  60
VKKKRNLPGN PDPSAEVIAL SPNTLVATNR FICEICSKGF QRDQNLQLHR RGHNLPWKLK  120
LRTSTEVRKR VYVCPEPSCV HHNPARALGD LTGIKKHFSR KHGEKKWKCD KCSKKYAVQS  180
DWKAHSKVCG TKEYKCDCGT IFSRRDSFIT HRAFCDALSE ENNKFNEGQQ LSSNMHSSNM  240
QQPIIPNLVA SLPINTNNHK HVHPLSLPHD LVMTMPAKPF NSNMAAFTRS LSSPSQLSST  300
SPNIMFEENA LHSPHMSATA LLQKAAQMSA TVNSNSSVIT EKSFVTSMAP PSYGVMNHDV  360
HDDGQQDLSH YNFNGIDGGG MGMSGLDMFN VILDQSKALS KIIEQNNRSN SNGVNLHAMN  420
GRSSGSIKGS EDVMTLDFLG IGVGGGGDGN FYDGDEQSEM AARDEIWRNW SNKNAGFESF  480
SAANISILPG REE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G03840.1	1e-101	C2H2 family protein