PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX97964.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MIKC_MADS
Protein Properties Length: 218aa    MW: 25050.7 Da    PI: 7.5423
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX97964.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.51.5e-27959151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                +ri+n++ rqvtfskRr+g++KKA+EL +LCda+v ++ifsstgklyey+s
  RDX97964.1  9 ERIDNSTSRQVTFSKRRKGLIKKAKELAILCDAQVGLVIFSSTGKLYEYAS 59
                69***********************************************86 PP
2K-box70.93.8e-24841671598
       K-box  15 eslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                 ++ ++e++ L+++++nLq+++R+l+Ge+L  Ls+++Lq Le+qLe sl+ +R kK+++l+++ieel +k + + +en +L kk+
  RDX97964.1  84 SEVKREAEILRQQLQNLQENHRQLMGEQLYGLSVRNLQDLENQLEMSLQGVRMKKEQILRDEIEELNRKGNLIYQENVELYKKV 167
                 57899***************************************************************************9996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MGRGKIVIER IDNSTSRQVT FSKRRKGLIK KAKELAILCD AQVGLVIFSS TGKLYEYAST  60
SMKSLIERYA TCKEEHHHLI NPESEVKREA EILRQQLQNL QENHRQLMGE QLYGLSVRNL  120
QDLENQLEMS LQGVRMKKEQ ILRDEIEELN RKGNLIYQEN VELYKKVYGT TDMAITSTNA  180
FVPLPYGMHV GGHPQQLIQL QLCQPEQEVC ETSDTATK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37940.14e-83MIKC_MADS family protein