PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX98116.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 326aa    MW: 37063 Da    PI: 8.445
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX98116.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF50.52.6e-161147339
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEE CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevavii 39
                i+ +  r++tf kR+ng++KK +E S+LC+++v+v++
  RDX98116.1 11 IKKEKARKTTFHKRKNGLMKKVYEFSTLCGVDVCVVL 47
                888999*****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MGRGRIPMEL IKKEKARKTT FHKRKNGLMK KVYEFSTLCG VDVCVVLDAP NFLDVPETWP  60
QDSREVTRVI QKFQNTTSDR RPKVYNVQEY YNDRMKKVEG EVSKVQKEKI KIMYPTWDDS  120
YNTLGEDQLR VFINILDAKL DACNQRMNML KRGFKGKAIA ESESDKAERL TPYMASNIGS  180
HINFMQNMSQ TQLLPPMNSI SDNNQVAFYP FQLSQSSQSS MFHFGQNCPQ LMQKNAMVDW  240
ANQVGAVACD PKMGDGSDKN HNSSACYYNG NMQTTQPYLP SQLQYDGTFQ TLPEPPGPPP  300
GLNTDFNILR NGLQNTATCM SSHDSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G55690.11e-24M-type_MADS family protein