PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX98778.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family AP2
Protein Properties Length: 326aa    MW: 36305.8 Da    PI: 10.1391
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX98778.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.52.2e-1558108155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 ++ykGVr+++  g+++AeI+ p+   k+ r+ lg+++t+eeAa a+++a+ +++g
  RDX98778.1  58 TRYKGVRRRS-HGKFAAEIKNPN---KSGRVLLGTYDTEEEAALAYDKAAFNIRG 108
                 68*****888.8******99983...369***********************998 PP
2AP263.64e-20186236255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp++ng  +r++lg+++t+e+Aa a+++a+ k++g
  RDX98778.1 186 HYRGVRRRP-WGKFAAEIRDPKKNG--ARVWLGTYDTEEKAALAYDKAAFKIRG 236
                 8********.***********9998..*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MDPYFTTTLE SDMPLSDPIQ HYDEGNGLNN NVLVSNENWF SGENTEGGKA HKEVPRWTRY  60
KGVRRRSHGK FAAEIKNPNK SGRVLLGTYD TEEEAALAYD KAAFNIRGSK AKLNFPHLIP  120
STLPLDTPSS HITHSPSSSS TSQDPKKRKG LADPKCDGES EKIVFRSEDE SAAVARDVHA  180
AATWKHYRGV RRRPWGKFAA EIRDPKKNGA RVWLGTYDTE EKAALAYDKA AFKIRGQKAK  240
LNFPHLIDSD DSNILSEPMK VTTSKPRLLK IPQPLSPSSL YSDDSSESQG TKRRKTLADL  300
LNKLAKNRSQ AKIYSPLVIA KLSSAQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44840.14e-34ERF family protein