PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX98784.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB_related

Protein Properties

Length: 683aa MW: 75505.3 Da PI: 6.3804

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX98784.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.5	1.3e-07	568	616	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v + G g+W+ I r Rt ++k++w+++l RDX98784.1 568 AWTIVEVNKLVEGVSRCGAGRWSEIKRLSFpsySYRTSVDLKDKWRNLL 616 7************************987899************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence
KFLTNDSSSP EENSNHFSTR SLSGACGSCS METVVGIEDN DDGKFEDSGV DRSSSALSSP 60 KQISNPIVYK LVRVEGDGRL VPATDDEVME VGDFLEYENS EMHVVADTGQ SLECISIERS 120 SSGKLRLECS EGTAEADLGK LNAKLQILQK VKQEEKQRIS CGSPVHSHVN IDTQCSADKF 180 PVMDGKAQSE TPYQEIPSIA SSLNYTHSNQ SGSIDQCSRP SEGVIESGSS ASAVYSNLKP 240 DLSMSDGEIC LDKLSIRELH ELFKVTFGRE TTVKDKQWLK RRIAMSLTNS CDVSATTFII 300 KDNKIVRKFE EDSSGNMNAA SLISSENMTE EEDVNFKDSS AVKDCGIDDN QVVSETRLRN 360 HNTGYGLEDE NHQEEQRAAK RIRKPTKRYI EELSENESRE HNPRLPISNK NMGLGHASPS 420 SYVWPARNAF SEARTYGTRL DSLGGSDVQI PCVSRVRRSR PRKDFVSLMK FHPTDMGEAA 480 KLSIKLLEHS SDAGNEIPDK VLKSRMPAKL HQPSASELAK EQCPVTGTME LRQELRPKKI 540 DPYSRTSDDD IVTVPTAKGG MRRKHHRAWT IVEVNKLVEG VSRCGAGRWS EIKRLSFPSY 600 SYRTSVDLKD KWRNLLKASF ALTPAPADEG INTRKHGTVS IPEETLLRVR ELAEMNSQVP 660 PNFSSSKVAA GAGSVHGDRS GYL

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence

KFLTNDSSSP EENSNHFSTR SLSGACGSCS METVVGIEDN DDGKFEDSGV DRSSSALSSP  60
KQISNPIVYK LVRVEGDGRL VPATDDEVME VGDFLEYENS EMHVVADTGQ SLECISIERS  120
SSGKLRLECS EGTAEADLGK LNAKLQILQK VKQEEKQRIS CGSPVHSHVN IDTQCSADKF  180
PVMDGKAQSE TPYQEIPSIA SSLNYTHSNQ SGSIDQCSRP SEGVIESGSS ASAVYSNLKP  240
DLSMSDGEIC LDKLSIRELH ELFKVTFGRE TTVKDKQWLK RRIAMSLTNS CDVSATTFII  300
KDNKIVRKFE EDSSGNMNAA SLISSENMTE EEDVNFKDSS AVKDCGIDDN QVVSETRLRN  360
HNTGYGLEDE NHQEEQRAAK RIRKPTKRYI EELSENESRE HNPRLPISNK NMGLGHASPS  420
SYVWPARNAF SEARTYGTRL DSLGGSDVQI PCVSRVRRSR PRKDFVSLMK FHPTDMGEAA  480
KLSIKLLEHS SDAGNEIPDK VLKSRMPAKL HQPSASELAK EQCPVTGTME LRQELRPKKI  540
DPYSRTSDDD IVTVPTAKGG MRRKHHRAWT IVEVNKLVEG VSRCGAGRWS EIKRLSFPSY  600
SYRTSVDLKD KWRNLLKASF ALTPAPADEG INTRKHGTVS IPEETLLRVR ELAEMNSQVP  660
PNFSSSKVAA GAGSVHGDRS GYL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	457	463	RRSRPRK
2	457	464	RRSRPRKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.1	1e-113	MYB_related family protein