PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX99016.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C3H

Protein Properties

Length: 690aa MW: 75448.9 Da PI: 6.4208

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX99016.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	22.1	2.6e-07	277	297	5	26
--SGGGGTS--TTTTT-SS-SS CS zf-CCCH 5 lCrffartGtCkyGdrCkFaHg 26 +C+ f++ G C+ Gd C +aHg RDX99016.1 277 PCPEFRK-GSCSKGDACEYAHG 297 8****.***********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 690 aa Download sequence
MCGVSKGKPS QLGLVMEDEY GKEGMHHRIS ALLEFSAADD LIGFKDAVEK EGHDVDGVGL 60 WYGRRVGSKR FGYEERTPLM VASMFGSLGV LGYILGTGRV DVNQASMSDG ATALHCAVAG 120 GSAASVEVVK LLLDASADVT AVDANGNRPL DLIVSVPNSI FNPRIRILQA LLEGTDAADQ 180 VCFMLPEVID QIEEQRQDMS MPRVWKDGTE KKDYPIDLSL PDIKNGIYST DEFRMYSFKV 240 KPCSRAYSHD WTECPFVHPG ENARRRDPRK YHYSCVPCPE FRKGSCSKGD ACEYAHGIFE 300 CWLHPAQYRT RLCKDESGCS RRVCFFAHKP EELRPLYAST GSAIPSPRSY SASASALEMG 360 TVSPIALGSP SVMIPPASTP PLTPSGASSP VAGSMWSQSN VSVPTLQLPK SRLKTASTAR 420 DMDLDIELHG LETHRRRQQL MMDEISGLSS PSNWKNSMPN SPSFRVSLSD HNGDLNRLSG 480 VKPSNFEDIY GSLDPSMLSK FHGMSLDTAG PQLQSPTGIQ MCQNMNQQLG GGYSSSLSGS 540 RSFRVDPSGE AALNPRAAAF AKRSQSFIER SVAKHHSELT SSKPFSNWGS PNGKLDWTIN 600 GEELNKLRKS SSFGIRSSNN PLTNASTKVQ ANVDDEPDVS WVHSLVKDAP PESGEYSVED 660 LRKKLQCHNG TDAIPAWLEQ LYSEQEQMVA

Sequence ? help Back to Top

Protein Sequence Length: 690 aa Download sequence

MCGVSKGKPS QLGLVMEDEY GKEGMHHRIS ALLEFSAADD LIGFKDAVEK EGHDVDGVGL  60
WYGRRVGSKR FGYEERTPLM VASMFGSLGV LGYILGTGRV DVNQASMSDG ATALHCAVAG  120
GSAASVEVVK LLLDASADVT AVDANGNRPL DLIVSVPNSI FNPRIRILQA LLEGTDAADQ  180
VCFMLPEVID QIEEQRQDMS MPRVWKDGTE KKDYPIDLSL PDIKNGIYST DEFRMYSFKV  240
KPCSRAYSHD WTECPFVHPG ENARRRDPRK YHYSCVPCPE FRKGSCSKGD ACEYAHGIFE  300
CWLHPAQYRT RLCKDESGCS RRVCFFAHKP EELRPLYAST GSAIPSPRSY SASASALEMG  360
TVSPIALGSP SVMIPPASTP PLTPSGASSP VAGSMWSQSN VSVPTLQLPK SRLKTASTAR  420
DMDLDIELHG LETHRRRQQL MMDEISGLSS PSNWKNSMPN SPSFRVSLSD HNGDLNRLSG  480
VKPSNFEDIY GSLDPSMLSK FHGMSLDTAG PQLQSPTGIQ MCQNMNQQLG GGYSSSLSGS  540
RSFRVDPSGE AALNPRAAAF AKRSQSFIER SVAKHHSELT SSKPFSNWGS PNGKLDWTIN  600
GEELNKLRKS SSFGIRSSNN PLTNASTKVQ ANVDDEPDVS WVHSLVKDAP PESGEYSVED  660
LRKKLQCHNG TDAIPAWLEQ LYSEQEQMVA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58620.1	0.0	C3H family protein