PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX99233.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

C2H2

Protein Properties

Length: 427aa MW: 47405.2 Da PI: 8.2508

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX99233.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	18.6	4.9e-06	57	79	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++C++ F r nL+ H r+H RDX99233.1 57 YVCEICNQGFQRDQNLQMHRRRH 79 9*********************9 PP
2	zf-C2H2	16.4	2.5e-05	134	156	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k + +s++k Hi+t+ RDX99233.1 134 WVCDKCSKGYAVQSDYKAHIKTC 156 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MLDNSASSGA PSSSDAAFAL SENGVANKRK RRPAGTPDPD AEVVSLSPTT LLESDRYVCE 60 ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET QGQKKRVFVC PEPSCLHHDP CHALGDLVGI 120 KKHFRRKHSN HKQWVCDKCS KGYAVQSDYK AHIKTCGTRG HSCDCGRVFS RVESFIEHQD 180 ACTVRQHRPE LQALQPACSS RTASSASPSS EANFSIAPLQ GLPLPKPAEQ PATTVLLTSE 240 THNNKSTTSH NLELQLLPSS TNSQETRNPK ENYGLKLSIG SCGNDKGNEP ERACSESHRN 300 PPERNNAIDY STLEVARLKE FAGEELKLAM AEKSYAEEAR REAKRQIEIA ELEFENAKKI 360 RKQAQAELAK ADELRKQAIK KISSTVMEIT CQTCKQQFQS STVGVPSEET SIVMSYMSSA 420 TTEGEAE

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MLDNSASSGA PSSSDAAFAL SENGVANKRK RRPAGTPDPD AEVVSLSPTT LLESDRYVCE  60
ICNQGFQRDQ NLQMHRRRHK VPWKLLKRET QGQKKRVFVC PEPSCLHHDP CHALGDLVGI  120
KKHFRRKHSN HKQWVCDKCS KGYAVQSDYK AHIKTCGTRG HSCDCGRVFS RVESFIEHQD  180
ACTVRQHRPE LQALQPACSS RTASSASPSS EANFSIAPLQ GLPLPKPAEQ PATTVLLTSE  240
THNNKSTTSH NLELQLLPSS TNSQETRNPK ENYGLKLSIG SCGNDKGNEP ERACSESHRN  300
PPERNNAIDY STLEVARLKE FAGEELKLAM AEKSYAEEAR REAKRQIEIA ELEFENAKKI  360
RKQAQAELAK ADELRKQAIK KISSTVMEIT CQTCKQQFQS STVGVPSEET SIVMSYMSSA  420
TTEGEAE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	28	33	KRKRRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.1	1e-151	C2H2 family protein