PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX99285.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

CO-like

Protein Properties

Length: 383aa MW: 43260.1 Da PI: 4.8433

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX99285.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	24.2	6.9e-08	12	57	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 +r C+++ + +++++C ++ +lC+ C H+ H++v+l RDX99285.1 12 ARACDNCVKVRARWYCAADDAFLCHGCDNMVHSAnqlasrHERVKL 57 578****99*******************66889999998875 PP
2	CCT	67.1	4.7e-23	329	372	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKr+tR+F KkirYe+RK +Ae+RpR+KGrFvk++ RDX99285.1 329 REARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRT 372 9*****************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MKEASALGAR TARACDNCVK VRARWYCAAD DAFLCHGCDN MVHSANQLAS RHERVKLQSA 60 SSKVNYSVTP HHNNKVSWYS GFTRKARTPR HNNNKHLLAQ QQSLHEEEEE EEGAFFNNFI 120 SLPIVPELGS EEPSLHDETE EQLLCRVPVL DVELCSMYNE VKDEVVAGEE AFDMDNFSSE 180 FLPLDMDLAE FAADVESLLG NGADEDSSEH VKESDLLLDC KEEEDDEIDV YVNGLGAKDS 240 MVKVKDEESP AQEEDMSKVR SNNKGIFLRL NYEDVITAWA SQGSPWTTVT PPEFNSHDCW 300 LDFLGSSGGD VQCCYGEVRS LRGLGDGERE ARVSRYREKR RTRLFAKKIR YEVRKLNAEK 360 RPRMKGRFVK RTSFVGATTA LPA

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MKEASALGAR TARACDNCVK VRARWYCAAD DAFLCHGCDN MVHSANQLAS RHERVKLQSA  60
SSKVNYSVTP HHNNKVSWYS GFTRKARTPR HNNNKHLLAQ QQSLHEEEEE EEGAFFNNFI  120
SLPIVPELGS EEPSLHDETE EQLLCRVPVL DVELCSMYNE VKDEVVAGEE AFDMDNFSSE  180
FLPLDMDLAE FAADVESLLG NGADEDSSEH VKESDLLLDC KEEEDDEIDV YVNGLGAKDS  240
MVKVKDEESP AQEEDMSKVR SNNKGIFLRL NYEDVITAWA SQGSPWTTVT PPEFNSHDCW  300
LDFLGSSGGD VQCCYGEVRS LRGLGDGERE ARVSRYREKR RTRLFAKKIR YEVRKLNAEK  360
RPRMKGRFVK RTSFVGATTA LPA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	340	356	RRTRLFAKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25440.1	3e-88	CO-like family protein