PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX99287.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MYB
Protein Properties Length: 322aa    MW: 35417.7 Da    PI: 7.3371
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX99287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.57.3e-191461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd +lv +++++G+g+Wk+++++ g+ R+ k+c++rw +yl
       RDX99287.1 14 KGPWTPEEDIILVSYIQEHGPGNWKAVPNHTGLLRCSKSCRLRWTNYL 61
                     79******************************99************97 PP
2Myb_DNA-binding51.13.1e-1667112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T +Ed+ ++++ ++lG++ W++Ia++++  Rt++++k++w++yl
       RDX99287.1  67 RGNFTDQEDKMIIHLQALLGNR-WAAIAAYLP-QRTDNDIKNYWNTYL 112
                      89********************.*********.*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MGRPPCCDKE GVKKGPWTPE EDIILVSYIQ EHGPGNWKAV PNHTGLLRCS KSCRLRWTNY  60
LRPGIKRGNF TDQEDKMIIH LQALLGNRWA AIAAYLPQRT DNDIKNYWNT YLKKKLKKLE  120
AGGCEGSLGD VGVSVSQPMS RGQWERRLQT DIHMAKKALT EALSPNKAYA STLLAESNSN  180
LFNDNGSNNT TKPTQSICYA SSADNIARLL KGWMKNAPKA SRAASAVTQN SFYNNLAGGD  240
TASSEGTKGS TSSSVELSEA FESLFGYESL DSSNSEFSQS LSPEATLFQD ESKPDIAGVD  300
MPFNLLEQWL LDDAACQQKL GF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28910.11e-102MYB family protein