PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDX99334.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family HD-ZIP
Protein Properties Length: 230aa    MW: 25942.7 Da    PI: 8.1531
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDX99334.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.6e-1984138256
                 T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 rk+ ++tkeq  +Le+ F+ + +++ ++++ LA++l+L+ rqV vWFqNrRa+ k
  RDX99334.1  84 RKKLKLTKEQSATLEDIFKLHTTLNPAQKQALAEQLNLKHRQVEVWFQNRRARTK 138
                 788899***********************************************98 PP
2HD-ZIP_I/II115.33.6e-3784173190
  HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLree 90 
                  +kk++l+keq+++LE+ F+ +++L+p +K++la++L+l+ rqv+vWFqnrRARtk+kq+E+d+++Lk+++++l++en rL+ke +eLr++
   RDX99334.1  84 RKKLKLTKEQSATLEDIFKLHTTLNPAQKQALAEQLNLKHRQVEVWFQNRRARTKLKQTEVDCDFLKKCCEKLTDENLRLKKELQELRAQ 173
                  69*************************************************************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MEDDEACITN LSLGLGMGGH VPKKNNKQKV PCLDLTFQLC PKGEQEEEEE AIDVDQQHDM  60
SKGLCLKHPN EESPDSNNSN NASRKKLKLT KEQSATLEDI FKLHTTLNPA QKQALAEQLN  120
LKHRQVEVWF QNRRARTKLK QTEVDCDFLK KCCEKLTDEN LRLKKELQEL RAQKIGPTPL  180
YIQLPKATTL TICSSCEKLL KPNEGKKAAI SDVVRNSSHK LKSSIGLEGI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133141RRARTKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37790.11e-54HD-ZIP family protein