PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX99362.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

LBD

Protein Properties

Length: 175aa MW: 19912.9 Da PI: 7.2023

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX99362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	121.2	5.6e-38	14	113	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99 +CaaC++lrr+C +C lapyfp ++ +kf vhk+FGasnv+++++ ++e++reda++++vyeA+ r+rdPvyG++g i +lq+ +++lkael+++k+ RDX99362.1 14 PCAACRTLRRRCDYKCLLAPYFPTHELEKFVGVHKVFGASNVIRMIQMVEETKREDAVKAMVYEAKERLRDPVYGSAGAIYQLQKMIQELKAELESMKS 112 7**********************************************************************************************9988 PP DUF260 100 e 100 + RDX99362.1 113 Q 113 7 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MGFHAEAKAT IHQPCAACRT LRRRCDYKCL LAPYFPTHEL EKFVGVHKVF GASNVIRMIQ 60 MVEETKREDA VKAMVYEAKE RLRDPVYGSA GAIYQLQKMI QELKAELESM KSQVSELCEQ 120 KDQLLSIYNN NTHGHLDPLF PPTFHAYASL SPDFDHPMAS DPLQGCSVYS NINKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07900.1	2e-41	LBD family protein