PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDX99438.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

SRS

Protein Properties

Length: 424aa MW: 44718.6 Da PI: 7.1025

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDX99438.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	215.3	1.4e-66	205	366	3	154
DUF702 3 sgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrelkskkqsalsstklssaeskkele 101 sg+++CqdCGnqakkdC+h RCRtCCksrgfdC+thvkstWvpaa+rrerq ++ aa++ +s +++ +k++r s++++++++++ ++++++++++ RDX99438.1 205 SGSSTCQDCGNQAKKDCSHGRCRTCCKSRGFDCTTHVKSTWVPAARRRERQLMAVAAAAAVGSSGSTSGAKKPRLVASQTTTTSHTSTSNNTTPPRSFD 303 6889********************************************9999999999999999999*9876666666666667778899999 PP DUF702 102 tss..........lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 t s lP +v+++avf+cvrv++vddge+e+aYq++v+igGhvfkG+LydqG+e+ RDX99438.1 304 TGSshqdvgfkesLPCQVRAPAVFKCVRVTAVDDGEDEFAYQAVVKIGGHVFKGFLYDQGVED 366 98899******************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
VATTRRFPSD SGAFADWSAP PSAVSGRADE LSLGFNASSA AAHGGAAMWP GASRSFNYNL 60 APHHDIFVVA PASSFHHHND AVLSDPNDNN GSNPATALGV NVFPLLTAAP CLAPPSMESE 120 GIMGNIGNHS HRNRIQLWQG HESPPQQHGE GIMGNNHNHN HNHTHNNNHR NRIQLWQDHD 180 QESPPPQQQH GDKHGAEHEA RGDASGSSTC QDCGNQAKKD CSHGRCRTCC KSRGFDCTTH 240 VKSTWVPAAR RRERQLMAVA AAAAVGSSGS TSGAKKPRLV ASQTTTTSHT STSNNTTPPR 300 SFDTGSSHQD VGFKESLPCQ VRAPAVFKCV RVTAVDDGED EFAYQAVVKI GGHVFKGFLY 360 DQGVEDKDGY PNLSELHLGG GGSDGGGRNN GVSSSSPLVD PSHVYAASGG GLLGGSSNYG 420 NPIN

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

VATTRRFPSD SGAFADWSAP PSAVSGRADE LSLGFNASSA AAHGGAAMWP GASRSFNYNL  60
APHHDIFVVA PASSFHHHND AVLSDPNDNN GSNPATALGV NVFPLLTAAP CLAPPSMESE  120
GIMGNIGNHS HRNRIQLWQG HESPPQQHGE GIMGNNHNHN HNHTHNNNHR NRIQLWQDHD  180
QESPPPQQQH GDKHGAEHEA RGDASGSSTC QDCGNQAKKD CSHGRCRTCC KSRGFDCTTH  240
VKSTWVPAAR RRERQLMAVA AAAAVGSSGS TSGAKKPRLV ASQTTTTSHT STSNNTTPPR  300
SFDTGSSHQD VGFKESLPCQ VRAPAVFKCV RVTAVDDGED EFAYQAVVKI GGHVFKGFLY  360
DQGVEDKDGY PNLSELHLGG GGSDGGGRNN GVSSSSPLVD PSHVYAASGG GLLGGSSNYG  420
NPIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	7e-63	SRS family protein