PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY00108.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 246aa MW: 28972.6 Da PI: 9.2308

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY00108.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.7	3.1e-19	22	69	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++vk++G g+W++++r g++R +k+c++rw +yl RDY00108.1 22 KGPWTAEEDRLLIQYVKLHGEGRWNSVSRLAGLKRNGKSCRLRWVNYL 69 79********************************************97 PP
2	Myb_DNA-binding	49.9	7.3e-16	75	119	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g T++E+ ++ ++++++G++ W+tIar ++ gRt++++k++w+++ RDY00108.1 75 KGQITPQEESIIQELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 119 5778****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MYWGVMAGNM GWGIIEEEGW RKGPWTAEED RLLIQYVKLH GEGRWNSVSR LAGLKRNGKS 60 CRLRWVNYLR PDLKKGQITP QEESIIQELH ARWGNRWSTI ARSLPGRTDN EIKNYWRTHF 120 KKKAKPPSDA AEKAKIRSSR RQQFQQQQLQ LKQQQVQQQQ QQQFQFNLDV EGIISLLEEN 180 DHRVPSISQE THEMVNMYQN TSEQQSYLYS MFNVNDNVSA PNEEILWDGL WNLDDIVPQA 240 KLVYTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24310.1	6e-76	MYB family protein