PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY00287.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MIKC_MADS
Protein Properties Length: 263aa    MW: 29989.7 Da    PI: 9.6371
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY00287.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF82.33e-26958150
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50
                krien+  rqvtf+kRr+g+lKKA+ELSvLCdae+ ++ifs +gklye +
  RDY00287.1  9 KRIENSVHRQVTFCKRRAGLLKKAKELSVLCDAEIGILIFSAHGKLYELA 58
                79*********************************************965 PP
2K-box62.31.9e-211021841799
       K-box  17 lqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                  ++e + Lk+ei++Lq+ +R l G + +++++ eLq Le++Le  + +iRs K++++l++i+ l++ke  l+ +nk+L+ k+ 
  RDY00287.1 102 AKEETNVLKQEIQTLQKGIRYLFGGGNKTMTMDELQVLEKNLEMWIYHIRSMKMNIMLQEIQALKEKEGTLKATNKYLHDKIV 184
                 6899****************************************************************************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MARGKVQLKR IENSVHRQVT FCKRRAGLLK KAKELSVLCD AEIGILIFSA HGKLYELATK  60
GSLSLSLSQT NISMQGLIER YMKFTPGAQP EAPPQQPHPL DAKEETNVLK QEIQTLQKGI  120
RYLFGGGNKT MTMDELQVLE KNLEMWIYHI RSMKMNIMLQ EIQALKEKEG TLKATNKYLH  180
DKIVENTVVS NFTSFATDDT SYPLIIQDGL AYWSNPPPTS FRPILNMNVN LSEFAFVNSS  240
PRPEDVLQRT HEFRNSESLF KLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.14e-71MIKC_MADS family protein