PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY00457.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

WOX

Protein Properties

Length: 221aa MW: 25421.5 Da PI: 9.0017

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY00457.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.8	5e-20	19	78	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++tkeq+ Le+l+ + r+p+ae++++++++l +++ ++V++WFqN++a++++ RDY00457.1 19 SRWSPTKEQISMLENLYMEgIRTPNAEQIQHITSRLkaygHIEGKNVFYWFQNHKARQRQ 78 6***************99************************************97 PP
2	Wus_type_Homeobox	113.1	1.4e-36	18	79	3	64
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +RW+Pt+eQi +Le+ly +G+rtPn+e+iq+it++L++yG+ie+kNVfyWFQN+kaR+rqk RDY00457.1 18 VSRWSPTKEQISMLENLYMEGIRTPNAEQIQHITSRLKAYGHIEGKNVFYWFQNHKARQRQK 79 68***********************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 221 aa Download sequence
MESHSAEIET GKRVTHSVSR WSPTKEQISM LENLYMEGIR TPNAEQIQHI TSRLKAYGHI 60 EGKNVFYWFQ NHKARQRQKL KQQSIRYSNR FLHTSHPIPQ NVVYSPYCLQ QSGIMNFYSQ 120 QPMVVASGGI SSRIDNVVPF GIRRMCDGPQ IYQQLQQSAM DYNLSMSNRE ALTLFPLHPT 180 GILEEKTTNQ VFSLAVDEHG RPGNQQSSDF FTSEQGSRET H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G59340.1	5e-44	WOX family protein