PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY00564.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

Trihelix

Protein Properties

Length: 390aa MW: 42639.7 Da PI: 10.3709

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY00564.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	49.4	1.2e-15	90	176	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +Li+a e+ +l+rg+lk+++W+ev++ + ++ ++ +qCk++++ ++k+yk +k+ + ++s++p+f++l+ RDY00564.1 90 CWSEGATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVsgreDYTKAPKTDIQCKNRIDTVKKKYKSEKAKIAAG---ATSKWPFFNRLD 176 7***********************************854334444556779*************99986...6779***997 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MKRVNWVYRR RPRKQIGGEE DMDDDDEIQS HPSPASGSPA SSPRANGRIT VTVAAPAPQP 60 APNSLALALP IQQPPKGNGG GGGGGGREDC WSEGATAVLI DAWGERYLEL SRGNLKQKHW 120 KEVAEIVSGR EDYTKAPKTD IQCKNRIDTV KKKYKSEKAK IAAGATSKWP FFNRLDLLIG 180 PSAKIPGAGG TSAAGNSNLQ SQKVPLGIPV GVRVSTNQYH HPQKPPPQQP QAVPLKNQKI 240 QFRRRGPPVE SDSEEREASS PASSDSFPPE SFERKRPRLT SSNAAKGSEG GGKGKGWGSA 300 VRELTQAILK FGEAYEQAEN SKLQQVVEME KQRMKFAKDL ELQRMQFFMK TQLEISQLKL 360 GRKGANPSNH LSTSNNNNNN NHHNNNSDSE

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MKRVNWVYRR RPRKQIGGEE DMDDDDEIQS HPSPASGSPA SSPRANGRIT VTVAAPAPQP  60
APNSLALALP IQQPPKGNGG GGGGGGREDC WSEGATAVLI DAWGERYLEL SRGNLKQKHW  120
KEVAEIVSGR EDYTKAPKTD IQCKNRIDTV KKKYKSEKAK IAAGATSKWP FFNRLDLLIG  180
PSAKIPGAGG TSAAGNSNLQ SQKVPLGIPV GVRVSTNQYH HPQKPPPQQP QAVPLKNQKI  240
QFRRRGPPVE SDSEEREASS PASSDSFPPE SFERKRPRLT SSNAAKGSEG GGKGKGWGSA  300
VRELTQAILK FGEAYEQAEN SKLQQVVEME KQRMKFAKDL ELQRMQFFMK TQLEISQLKL  360
GRKGANPSNH LSTSNNNNNN NHHNNNSDSE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	9	14	RRRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G14180.1	4e-49	Trihelix family protein