PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY00877.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

AP2

Protein Properties

Length: 520aa MW: 57502.1 Da PI: 6.7984

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY00877.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	53.3	6.7e-17	167	216	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g RDY00877.1 167 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 216 78*****************......55**********************997 PP
2	AP2	43.7	6.6e-14	259	309	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV+ +k grW+A+ + +k+++lg f+t+ eAa+a+++a+ k +g RDY00877.1 259 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDTEIEAARAYDKAAIKCNG 309 89******.7**5553..2.26******99********99776 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MWDLNDSPDQ RKKDEESEGC SSLKTSIDGD DENNKGKRVG SVSNSSSSAV VIEDGSEEEE 60 EDEEEEEEQG GRRSMKKRSS RIFGFSVTQD EESMDSDLPP VTRQFFPVEE ADVAVASGGG 120 SAGSSTFPRA HWVGVKFCQS ETLGAGKSVE VSQPMKKSRR GPRSRSSQYR GVTFYRRTGR 180 WESHIWDCGK QVYLGGFDTA HAAARAYDRA AIKFRGVEAD INFNIEDYED DLKQMSNLTK 240 EEFVHVLRRQ STGFPRGSSK YRGVTLHKCG RWEARMGQFL GKKYVYLGLF DTEIEAARAY 300 DKAAIKCNGK EAVTNFDPSI YENELNSEST GKAADHNLDL SLGNSSSKSG NNNALGNHAT 360 NAATHDQHLP SESNWRNGGS KSKLVNILPK PCNRSNKDAH GRDVHGESEA LRMLSQTHLH 420 SPASNEMQRY GPYRSPGGES QMLQNFAHIH PPNFHFPSSS IGGRIGSDLS LSMADQQQWQ 480 SGPPHYLATA AASSGFPQQI RPSSQGWLQK NGFHTLMRPS

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MWDLNDSPDQ RKKDEESEGC SSLKTSIDGD DENNKGKRVG SVSNSSSSAV VIEDGSEEEE  60
EDEEEEEEQG GRRSMKKRSS RIFGFSVTQD EESMDSDLPP VTRQFFPVEE ADVAVASGGG  120
SAGSSTFPRA HWVGVKFCQS ETLGAGKSVE VSQPMKKSRR GPRSRSSQYR GVTFYRRTGR  180
WESHIWDCGK QVYLGGFDTA HAAARAYDRA AIKFRGVEAD INFNIEDYED DLKQMSNLTK  240
EEFVHVLRRQ STGFPRGSSK YRGVTLHKCG RWEARMGQFL GKKYVYLGLF DTEIEAARAY  300
DKAAIKCNGK EAVTNFDPSI YENELNSEST GKAADHNLDL SLGNSSSKSG NNNALGNHAT  360
NAATHDQHLP SESNWRNGGS KSKLVNILPK PCNRSNKDAH GRDVHGESEA LRMLSQTHLH  420
SPASNEMQRY GPYRSPGGES QMLQNFAHIH PPNFHFPSSS IGGRIGSDLS LSMADQQQWQ  480
SGPPHYLATA AASSGFPQQI RPSSQGWLQK NGFHTLMRPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36920.1	1e-119	AP2 family protein