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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | RDY00964.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
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| Family | NAC | ||||||||
| Protein Properties | Length: 282aa MW: 32287.6 Da PI: 8.6708 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 174 | 4.3e-54 | 9 | 134 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99
lppGfrFhPtdeel+v+yL+++++++++++ ++i+evdiyk++Pw+Lp k + +e+ewyfFs+rd+ky++g r+nrat sgyWkatg+dk+++s ++++
RDY00964.1 9 LPPGFRFHPTDEELIVYYLCNQATSRPCPA-SIIPEVDIYKFDPWELPDKSDFGENEWYFFSPRDRKYPNGVRPNRATVSGYWKATGTDKAIFS-GSKH 105
79****************************.89***************888899****************************************.999* PP
NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
vg+kk+Lvfykg+ pkg kt+W+mheyrl
RDY00964.1 106 VGVKKSLVFYKGKPPKGLKTEWIMHEYRL 134
***************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 282 aa Download sequence |
MEGRTSSLLP PGFRFHPTDE ELIVYYLCNQ ATSRPCPASI IPEVDIYKFD PWELPDKSDF 60 GENEWYFFSP RDRKYPNGVR PNRATVSGYW KATGTDKAIF SGSKHVGVKK SLVFYKGKPP 120 KGLKTEWIMH EYRLIGSRRQ ANRQIGSMRL DDWVLCRIYK KKNMGKSLEA KEDYPIAQMN 180 LAPANNEVEE EVMKFPRTSS LTHLLEMDYL GPISQILSDG SYNSTFDFQI NTANGGIDPF 240 IKPQLVDMPN NPYAVDSGKY QVKQNSTINP TIFVNQVYDQ RG |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G69490.1 | 1e-113 | NAC family protein | ||||




