PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY01600.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MYB

Protein Properties

Length: 240aa MW: 27666.8 Da PI: 6.4185

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY01600.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.3	4.8e-15	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd++l ++v+ +G g W+ ++r g++R++k+ + rw++yl RDY01600.1 15 RGAWSAEEDKILMKYVEVHGEGKWREVSRSAGLKRSGKSSRFRWLNYL 62 89********************************************97 PP
2	Myb_DNA-binding	50.1	6.3e-16	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l RDY01600.1 68 RGNISSDEEDLIIRLHNLLGNR-WSLIAGRIP-GRTDNEIKNYWNSHL 113 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MKRKANCDNQ DAVNRGAWSA EEDKILMKYV EVHGEGKWRE VSRSAGLKRS GKSSRFRWLN 60 YLKPDIKRGN ISSDEEDLII RLHNLLGNRW SLIAGRIPGR TDNEIKNYWN SHLRKKIEKH 120 NQSRVESKEC TKNFLDIINT TTHAESDSVN TMNNVVNTTC WDSHNPFAST SQDDHDNYEK 180 LIVPNEGCHC GNGCASVEIP KDFGDEACWL EDSLIDQPWH ESWKLIDFFP PDQVANFFSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	7e-54	MYB family protein