PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY01616.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

bHLH

Protein Properties

Length: 396aa MW: 44071.2 Da PI: 9.597

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY01616.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41	3.4e-13	324	369	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el+P+ k s ae+L +AveYIk+Lq RDY01616.1 324 SIAERVRRTRISERIRKLQELVPNM----EKQTSTAEMLDLAVEYIKDLQ 369 689*******************7....477***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 396 aa Download sequence
MDSNSRYQVQ QQQQPNSGLL RFRSAPTPLL ANFKQGEAPN NGNVWEGSEP VLRFLNSGDA 60 HDTTSPSLRE FVDNNKASNN NKAAKESSIP SSPLSRMNSQ QGYSTCVLPS RYPRHDSSVT 120 SPMMMPSMGM DQSATKSFNS HLLRQSTSPA AHFPNNISFQ NGYDTVKGVG NYGEVNGHDG 180 EVSLSMNGMK NQISFSSRSP SSLGMLSPTS KMVTSPEDGR QVGSNGDAGY YGPRFPYTSW 240 NETSHLKRQR SSNDEIPSDA QYLIQLRCHT QNGELGNQVH TLPHCLSLPR ASSEIFAMDN 300 LLQFTDSVPC KIRAKRGFAT HPRSIAERVR RTRISERIRK LQELVPNMEK QTSTAEMLDL 360 AVEYIKDLQK QFKTLSERRA KCKCINMHKS GTDQIA

Sequence ? help Back to Top

Protein Sequence Length: 396 aa Download sequence

MDSNSRYQVQ QQQQPNSGLL RFRSAPTPLL ANFKQGEAPN NGNVWEGSEP VLRFLNSGDA  60
HDTTSPSLRE FVDNNKASNN NKAAKESSIP SSPLSRMNSQ QGYSTCVLPS RYPRHDSSVT  120
SPMMMPSMGM DQSATKSFNS HLLRQSTSPA AHFPNNISFQ NGYDTVKGVG NYGEVNGHDG  180
EVSLSMNGMK NQISFSSRSP SSLGMLSPTS KMVTSPEDGR QVGSNGDAGY YGPRFPYTSW  240
NETSHLKRQR SSNDEIPSDA QYLIQLRCHT QNGELGNQVH TLPHCLSLPR ASSEIFAMDN  300
LLQFTDSVPC KIRAKRGFAT HPRSIAERVR RTRISERIRK LQELVPNMEK QTSTAEMLDL  360
AVEYIKDLQK QFKTLSERRA KCKCINMHKS GTDQIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	9e-57	bHLH family protein