![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | RDY01643.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
|
||||||||
| Family | NAC | ||||||||
| Protein Properties | Length: 275aa MW: 31505.4 Da PI: 5.9649 | ||||||||
| Description | NAC family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | NAM | 164.2 | 4.6e-51 | 10 | 138 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98
lppGfrF P+deelv++yL kk++++++ ++ e+d++ +ePw+Lp+ +k + +ewyfFs rd+kyatg r+nrat+sgyWkatgkd++v++ ++e
RDY01643.1 10 LPPGFRFYPSDEELVCHYLYKKIANEQVLK-GTLVEIDLHICEPWQLPEVAKLNATEWYFFSFRDRKYATGYRTNRATTSGYWKATGKDRTVMDPiTQE 107
79************************9655.78***************88888999**************************************99999 PP
NAM 99 lvglkktLvfykgrapkgektdWvmheyrle 129
+vg++ktLvfy++rap+g kt W+mhe+rle
RDY01643.1 108 VVGMRKTLVFYRNRAPNGIKTGWIMHEFRLE 138
9***************************985 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 275 aa Download sequence |
MGLRDIGASL PPGFRFYPSD EELVCHYLYK KIANEQVLKG TLVEIDLHIC EPWQLPEVAK 60 LNATEWYFFS FRDRKYATGY RTNRATTSGY WKATGKDRTV MDPITQEVVG MRKTLVFYRN 120 RAPNGIKTGW IMHEFRLETP HMPPKEDWVL CRVFHKSKED NSSQVVYETT CTPSSLTLAS 180 SSPPNQPMLG GYNRLPSMPT FNPNQNTSFM GLLHFARETN TNNNSTVTQI SSKADDGYGF 240 LWDMDLEENT LEDAVASNLD TIRFDLDNNN NNNNM |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT4G28530.1 | 5e-95 | NAC family protein | ||||




