PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY01760.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

MIKC_MADS

Protein Properties

Length: 260aa MW: 30325.7 Da PI: 10.0068

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY01760.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	93.3	1.2e-29	52	102	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 +ri+nk+nrqvtfskRrng+lKKA+ELSvLCdae+a+iifss+gkl+ yss RDY01760.1 52 ERIQNKINRQVTFSKRRNGLLKKAFELSVLCDAEIALIIFSSRGKLFQYSS 102 69***********************************************96 PP
2	K-box	70.3	5.9e-24	121	214	4	97
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 ++++++e+++++ l+qel L+ + e+Lqr+qR+l+Ge+Le+Ls+keLq+Le+qL++ l + R++ ++ l++ i+elq+k ++l++ nk L++k RDY01760.1 121 QTNSEAEHQQQQCLYQELLILRVKHESLQRTQRNLMGEELEPLSIKELQNLEKQLDRTLAQARKHLKQKLMTRIDELQEKVHNLEQFNKHLESK 214 3444589999*********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MLRPLLYKLS FTPVHVAFFL SFISAIEREA VNRIGSRDRE RGSMGRGKVV LERIQNKINR 60 QVTFSKRRNG LLKKAFELSV LCDAEIALII FSSRGKLFQY SSTDINRIIE RYRQCCFDIS 120 QTNSEAEHQQ QQCLYQELLI LRVKHESLQR TQRNLMGEEL EPLSIKELQN LEKQLDRTLA 180 QARKHLKQKL MTRIDELQEK VHNLEQFNKH LESKERGQCT QICEGSTNNR IWLHDAQVTQ 240 FESGTTGSFR LQQTTASNGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45650.1	4e-55	MIKC_MADS family protein