PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY01925.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 168aa    MW: 19338.6 Da    PI: 10.412
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY01925.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF49.17.3e-162061344
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTS CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstg 44
                i++++ r+vt+ kR++gi+KK +EL +LC++ ++ ii s+ +
  RDY01925.1 20 ISDDTARKVTYKKRKKGIIKKVSELTILCGIPACAIISSPFD 61
                99***********************************99865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MFGTRDSATM ARKKVKLALI SDDTARKVTY KKRKKGIIKK VSELTILCGI PACAIISSPF  60
DPMPETWPDS KATKQVIQRY MNASTLDQSK NINQESFIKQ RIAKAHHQLR KQRQDNLDKQ  120
NTLSLFQYIQ GEEHLPDTIQ ELKKLHKLIE KNMKEIENKL AKIICESS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11234RKKVKLALISDDTARKVTYKKRK
23135KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48670.18e-31M-type_MADS family protein