PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RDY01926.1

Organism

Mucuna pruriens

Taxonomic ID

157652

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna

Family

M-type_MADS

Protein Properties

Length: 156aa MW: 18124.2 Da PI: 9.9994

Description

M-type_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RDY01926.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	49.2	6.8e-16	10	50	2	42
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42 +i+n + r+ t+ kR++gi+KK +EL vLC++ ++ ii s+ RDY01926.1 10 FISNVTARKATYKKRKKGIMKKVSELTVLCGIPACAIISSP 50 8*************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence
MARKKVRLAF ISNVTARKAT YKKRKKGIMK KVSELTVLCG IPACAIISSP FDSKPEVWPN 60 PEGVKQVIQK YLNASVLDEN KNVNQESFIA QSIIKAQDQL KKQRRENHEK EMTLYMFQYM 120 QGEDLPNNVN ELKELNNMIE KNMKEIENKF VVLDYI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	3	25	RKKVRLAFISNVTARKATYKKRK
2	22	26	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48670.1	2e-34	M-type_MADS family protein