PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY01929.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 264aa    MW: 30503.2 Da    PI: 10.5588
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY01929.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF42.48.7e-141150342
                --SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-T CS
      SRF-TF  3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifss 42
                i++ + r+ t+ kR++gi+KK +EL +LC++ ++ ii s+
  RDY01929.1 11 ISDATARKSTYKKRKKGIIKKVSELTILCGIPACAIISSP 50
                99***********************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MTRKKVKLAY ISDATARKST YKKRKKGIIK KVSELTILCG IPACAIISSP FDPKPEIWPN  60
PEGANQVIQR YLNASVLDQS KNVNQESFII QRIVKAQDQL KKQRCENHEK EMTLCMFQYM  120
KGEDLPNTAN ELKELDRLLE KNMRQIGNKL AALNSKNYTT MWSLSGLHEN KITEHFCDKE  180
LLKLRKRTNK ENKSKSTHWV RFDKPSQRIF ATMRMSTKGN HSNQHANAIY SLHGSKHASR  240
SRKVRNEDMT MTATDSTYAI QLSR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1325RKKVKLAYISDATARKSTYKKRK
22226KKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26630.11e-30M-type_MADS family protein