PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY01941.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 112aa    MW: 12717.9 Da    PI: 12.3252
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY01941.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF74.77.3e-2454103150
                 S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS
      SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 
                 krienks rq+tfskRrng++KKA  LS+L da+ a+++fsstgkl+e s
  RDY01941.1  54 KRIENKSTRQITFSKRRNGLMKKARKLSILSDANMALVVFSSTGKLFELS 103
                 79********************************************9966 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MKNRVIGHGF VAGKPVSEQS RKTVSLGGDR KERNRKVARA LARRRMGRKK VEIKRIENKS  60
TRQITFSKRR NGLMKKARKL SILSDANMAL VVFSSTGKLF ELSNGDRYTQ IA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10140.28e-28MIKC_MADS family protein