PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY01947.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family MIKC_MADS
Protein Properties Length: 283aa    MW: 32552.2 Da    PI: 9.2806
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY01947.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF99.51.3e-314999151
                S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
      SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s
  RDY01947.1 49 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 99
                79***********************************************96 PP
2K-box96.15.6e-321332161699
       K-box  16 slqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                 s+qqe+ kLk+++e Lqr+qR+l+GedL++Ls keL++Le+qL++slk+iRs++++++l+q+++lq+ke+ l+e+n++Lr++le
  RDY01947.1 133 SSQQEYLKLKARYEALQRSQRNLMGEDLGPLSSKELESLERQLDSSLKQIRSTRTQFMLDQLSDLQRKEHLLSEANRSLRQRLE 216
                 689******************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MRIQDTPTHS ERATKIFTGF ILISYFCKKE KVKEKERERE MGRGRVELKR IENKINRQVT  60
FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS SSMLKTLERY QKCNYGAPEA  120
NVSTREALVM ELSSQQEYLK LKARYEALQR SQRNLMGEDL GPLSSKELES LERQLDSSLK  180
QIRSTRTQFM LDQLSDLQRK EHLLSEANRS LRQRLEGYQI NPLQLNPGVE DMGYGRHPGQ  240
TQGDALFQQL ECEPTLQIGY QPDPVSVVTA GPSMSNFMAG WLP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.21e-124MIKC_MADS family protein