PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY01948.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 92aa    MW: 10384 Da    PI: 10.4738
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY01948.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF77.68.9e-251053245
                ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
      SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                 ienk  rq+tfskRrng++KKA ELS+LCda+va+++fsstg 
  RDY01948.1 10 GIENKCTRQITFSKRRNGLMKKARELSILCDANVALVVFSSTGS 53
                69****************************************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MGRKKVEIKG IENKCTRQIT FSKRRNGLMK KARELSILCD ANVALVVFSS TGSSSSSVTV  60
TVNNNNRVIS CYKHRQIGVL IHDELDLEYI NR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10140.21e-20MIKC_MADS family protein