PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RDY01949.1
Organism
Mucuna pruriens
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Mucuna
Family M-type_MADS
Protein Properties Length: 68aa    MW: 7872.35 Da    PI: 10.746
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RDY01949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF30.83.9e-10240546
                SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEE CS
      SRF-TF  5 nksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkl 46
                nk++rqvtf+kRr+g+l KA+  S  C+   a+iifs+ gk+
  RDY01949.1  2 NKIKRQVTFAKRREGLLRKAFR-SLRCQ--DALIIFSNGGKF 40
                99******************96.87776..478888888886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 68 aa     Download sequence    
MNKIKRQVTF AKRREGLLRK AFRSLRCQDA LIIFSNGGKF MLKTIEMYQK CNYGVPEANV  60
STQEALVM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24260.31e-22MIKC_MADS family protein